Amborella_trichopoda

Number Species Version
1 Amborella_trichopoda v1.0


Order Family
Amborellales Amborellaceae

References Reference_title
The Amborella Genome and the Evolution of Flowering Plants

Database_name Phytozome

Euryale_ferox

Number Species Version
1 Euryale_ferox v1.0


Order Family
Nymphaeales Nymphaeaceae

References Reference_title
Prickly waterlily and rigid hornwort genomes shed light on early angiosperm evolution

Database_name CoGe

Nymphaea_colorata

Number Species Version
2 Nymphaea_colorata v1.2


Order Family
Nymphaeales Nymphaeaceae

References Reference_title
The water lily genome and the early evolution of flowering plants

Database_name Phytozome

Magnolia_biondii

Number Species Version
1 Magnolia_biondii v14.0


Order Family
Magnoliales Magnoliaceae

References Reference_title
The genome of Magnolia biondii Pamp. provides insights into the evolution of Magnoliales and biosynthesis of terpenoids

Database_name Dryad

Cinnamomum_kanehirae

Number Species Version
1 Cinnamomum_kanehirae v3.0


Order Family
Laurales Lauraceae

References Reference_title
Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution

Database_name Phytozome

Aristolochia_contorta

Number Species Version
1 Aristolochia_contorta v1.0


Order Family
Piperales Aristolochiaceae

References Reference_title
Chromosome-level genome assembly of Aristolochia contorta provides insights into the biosynthesis of benzylisoquinoline alkaloids and aristolochic acids

Database_name CoGe

Aristolochia_fimbriata

Number Species Version
2 Aristolochia_fimbriata v1.0


Order Family
Piperales Aristolochiaceae

References Reference_title
Insights into angiosperm evolution, floral development and chemical biosynthesis from the Aristolochia fimbriata genome

Database_name NGDC

Saururus_chinensis

Number Species Version
3 Saururus_chinensis v1.0


Order Family
Piperales Saururaceae

References Reference_title
The Saururus chinensis genome provides insights into the evolution of pollination strategies and herbaceousness in magnoliids

Database_name NGDC

Chloranthus_spicatus

Number Species Version
1 Chloranthus_spicatus v1.0


Order Family
Chloranthales Chloranthaceae

References Reference_title
Chloranthus genome provides insights into the early diversification of angiosperms

Database_name CNGB

Lemna_minor

Number Species Version
1 Lemna_minor v1.0


Order Family
Alismatales Araceae

References Reference_title
The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications

Database_name CoGe

Spirodela_polyrhiza

Number Species Version
2 Spirodela_polyrhiza v2.0


Order Family
Alismatales Araceae

References Reference_title
Plant evolution and environmental adaptation unveiled by long-read whole-genome sequencing of Spirodela

Database_name Phytozome

Lemna_minuta

Number Species Version
3 Lemna_minuta v1.0


Order Family
Alismatales Araceae

References Reference_title
The genome and preliminary single-nuclei transcriptome of Lemna minuta reveals mechanisms of invasiveness

Database_name CoGe

Spirodela_intermedia

Number Species Version
4 Spirodela_intermedia v2.0


Order Family
Alismatales Araceae

References Reference_title
Chromosome-scale genome assembly for the duckweed Spirodela intermedia, integrating cytogenetic maps, PacBio and Oxford Nanopore libraries

Database_name NCBI

Zostera_marina

Number Species Version
5 Zostera_marina v2.2


Order Family
Alismatales Zosteraceae

References Reference_title
The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

Database_name Phytozome

Amorphophallus_konjac

Number Species Version
6 Amorphophallus_konjac v1.0


Order Family
Alismatales Araceae

References Reference_title
A chromosome-level genome assembly of Amorphophallus konjac provides insights into konjac glucomannan biosynthesis

Database_name Figshare

Avena_eriantha

Number Species Version
1 Avena_eriantha v1.0


Order Family
Poales Poaceae

References Reference_title
Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species

Database_name CoGe

Avena_atlantica

Number Species Version
2 Avena_atlantica v1.0


Order Family
Poales Poaceae

References Reference_title
Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species

Database_name CoGe

Bonia_amplexicaulis

Number Species Version
3 Bonia_amplexicaulis v1.0


Order Family
Poales Poaceae

References Reference_title
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos

Database_name Bamboo genome database

Brachypodium_distachyon

Number Species Version
4 Brachypodium_distachyon v3.1


Order Family
Poales Poaceae

References Reference_title
Genome sequencing and analysis of the model grass Brachypodium distachyon

Database_name Phytozome

Brachypodium_hybridum

Number Species Version
5 Brachypodium_hybridum v1.1


Order Family
Poales Poaceae

References Reference_title
Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors

Database_name Phytozome

Brachypodium_stace

Number Species Version
6 Brachypodium_stace v1.1


Order Family
Poales Poaceae

References Reference_title
Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors

Database_name Phytozome

Cenchrus_purpureus

Number Species Version
7 Cenchrus_purpureus v1.0


Order Family
Poales Poaceae

References Reference_title
The elephant grass (Cenchrus purpureus) genome provides insights into anthocyanidin accumulation and fast growth

Database_name NGDC

Cleistogenes_songorica

Number Species Version
8 Cleistogenes_songorica v1.0


Order Family
Poales Poaceae

References Reference_title
The genome of Cleistogenes songorica provides a blueprint for functional dissection of dimorphic flower differentiation and drought adaptability

Database_name NGDC

Coix_lacrymajobi

Number Species Version
9 Coix_lacrymajobi v1.0


Order Family
Poales Poaceae

References Reference_title
Genome Assembly and Annotation of Soft-Shelled Adlay (Coix lacryma-jobi Variety ma-yuen), a Cereal and Medicinal Crop in the Poaceae Family

Database_name Coix lacryma-jobi Genome DB

Dichanthelium_oligosanthes

Number Species Version
10 Dichanthelium_oligosanthes v2.0


Order Family
Poales Poaceae

References Reference_title
The draft genome of the C3 panicoid grass species Dichanthelium oligosanthes

Database_name NCBI

Eragrostis_curvula

Number Species Version
11 Eragrostis_curvula v1.0


Order Family
Poales Poaceae

References Reference_title
A high-quality genome of Eragrostis curvula grass provides insights into Poaceae evolution and supports new strategies to enhance forage quality

Database_name NCBI

Guadua_angustifolia

Number Species Version
12 Guadua_angustifolia v1.0


Order Family
Poales Poaceae

References Reference_title
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos

Database_name Bamboo genome database

Miscanthus_sinensis

Number Species Version
13 Miscanthus_sinensis v7.1


Order Family
Poales Poaceae

References Reference_title
Genome biology of the paleotetraploid perennial biomass crop Miscanthus

Database_name Phytozome

Oryza_brachyantha

Number Species Version
14 Oryza_brachyantha v1.4


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_rufipogon

Number Species Version
15 Oryza_rufipogon v1.0


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_sativa

Number Species Version
16 Oryza_sativa v7.0


Order Family
Poales Poaceae

References Reference_title
Chromosomal-level genome assembly of the semi-dwarf rice Taichung Native 1, an initiator of Green Revolution

Database_name Phytozome

Panicum_hallii

Number Species Version
17 Panicum_hallii v3.1


Order Family
Poales Poaceae

References Reference_title
The genomic landscape of molecular responses to natural drought stress in Panicum hallii

Database_name Phytozome

Panicum_virgatum

Number Species Version
18 Panicum_virgatum v5.1


Order Family
Poales Poaceae

References Reference_title
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass

Database_name Phytozome

Phyllostachys_edulis

Number Species Version
19 Phyllostachys_edulis v1.0


Order Family
Poales Poaceae

References Reference_title
Chromosome-level reference genome and alternative splicing atlas of moso bamboo (Phyllostachys edulis)

Database_name GigaDB

Saccharum_spontaneum

Number Species Version
20 Saccharum_spontaneum v1.0


Order Family
Poales Poaceae

References Reference_title
Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

Database_name The Ming Laboratory

Saccharum_hybrid

Number Species Version
21 Saccharum_hybrid R570


Order Family
Poales Poaceae

References Reference_title
A mosaic monoploid reference sequence for the highly complex genome of sugarcane

Database_name sugarcane genome hub

Secale_cereale

Number Species Version
22 Secale_cereale Lo7


Order Family
Poales Poaceae

References Reference_title
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

Database_name e!DAL

Setaria_italica

Number Species Version
23 Setaria_italica v2.2


Order Family
Poales Poaceae

References Reference_title
Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential

Database_name Phytozome

Setaria_viridis

Number Species Version
24 Setaria_viridis v2.1


Order Family
Poales Poaceae

References Reference_title
Reference Genome for the Highly Transformable Setaria viridis ME034V

Database_name Phytozome

Sorghum_bicolor

Number Species Version
25 Sorghum_bicolor v3.1


Order Family
Poales Poaceae

References Reference_title
A chromosome-scale assembly of the sorghum genome using nanopore sequencing and optical mapping

Database_name Phytozome

Triticum_aestivum

Number Species Version
26 Triticum_aestivum v1.0


Order Family
Poales Poaceae

References Reference_title
Multiple wheat genomes reveal global variation in modern breeding

Database_name EnsemblPlants

Triticum_turgidum

Number Species Version
27 Triticum_turgidum v1.0


Order Family
Poales Poaceae

References Reference_title
Durum wheat genome highlights past domestication signatures and future improvement targets

Database_name NCBI

Triticum_urartu

Number Species Version
28 Triticum_urartu v1.0


Order Family
Poales Poaceae

References Reference_title
Genome sequence of the progenitor of wheat A subgenome Triticum urartu

Database_name MBKBASE

Zea_mays

Number Species Version
29 Zea_mays v4.0


Order Family
Poales Poaceae

References Reference_title
Genome assembly and population genomic analysis provide insights into the evolution of modern sweet corn

Database_name Phytozome

Zoysia_japonica

Number Species Version
30 Zoysia_japonica v1.1


Order Family
Poales Poaceae

References Reference_title
Sequencing and comparative analyses of the genomes of zoysiagrasses

Database_name Zoysia Genome Database

Zoysia_matrella

Number Species Version
31 Zoysia_matrella v1.0


Order Family
Poales Poaceae

References Reference_title
Sequencing and comparative analyses of the genomes of zoysiagrasses

Database_name Zoysia Genome Database

Zoysia_pacifica

Number Species Version
32 Zoysia_pacifica v1.0


Order Family
Poales Poaceae

References Reference_title
Sequencing and comparative analyses of the genomes of zoysiagrasses

Database_name Zoysia Genome Database

Kobresia_littledalei

Number Species Version
33 Kobresia_littledalei v1.0


Order Family
Poales Cyperaceae

References Reference_title
Genome sequence of Kobresia littledalei, the first chromosome-level genome in the family Cyperaceae

Database_name NCBI

Ananas_comosus

Number Species Version
34 Ananas_comosus v3.0


Order Family
Poales Bromeliaceae

References Reference_title
The draft genome of MD-2 pineapple using hybrid error correction of long reads

Database_name Phytozome

Leersia_perrieri

Number Species Version
35 Leersia_perrieri v1.0


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Olyra_latifolia

Number Species Version
36 Olyra_latifolia v1.0


Order Family
Poales Poaceae

References Reference_title
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos

Database_name Bamboo genome database

Oryza_barthii

Number Species Version
37 Oryza_barthii v1.0


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_glaberrima

Number Species Version
38 Oryza_glaberrima v1.0


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_glumaepatula

Number Species Version
39 Oryza_glumaepatula v1.5


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_meridionalis

Number Species Version
40 Oryza_meridionalis v1.3


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_nivara

Number Species Version
41 Oryza_nivara v1.0


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Oryza_punctata

Number Species Version
42 Oryza_punctata v1.0


Order Family
Poales Poaceae

References Reference_title
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Database_name CyVerse Data Commons

Achnatherum_splendens

Number Species Version
43 Achnatherum_splendens v1.0


Order Family
Poales Poaceae

References Reference_title
The genome sequence provides insights into salt tolerance of Achnatherum splendens (Gramineae), a constructive species of alkaline grassland

Database_name NGDC

Dendrocalamus_latiflorus

Number Species Version
44 Dendrocalamus_latiflorus v1.0


Order Family
Poales Poaceae

References Reference_title
Allele-aware chromosome-scale assembly of the allopolyploid genome of hexaploid Ma bamboo (Dendrocalamus latiflorus Munro)

Database_name SelfDB

Echinochloa_colona

Number Species Version
45 Echinochloa_colona v1.0


Order Family
Poales Poaceae

References Reference_title
Genomic insights into the evolution of Echinochloa species as weed and orphan crop

Database_name NGDC

Echinochloa_crusgalli

Number Species Version
46 Echinochloa_crusgalli v1.0


Order Family
Poales Poaceae

References Reference_title
Genomic insights into the evolution of Echinochloa species as weed and orphan crop

Database_name NGDC

Echinochloa_oryzicola

Number Species Version
47 Echinochloa_oryzicola v1.0


Order Family
Poales Poaceae

References Reference_title
Genomic insights into the evolution of Echinochloa species as weed and orphan crop

Database_name NGDC

Eremochloa_ophiuroides

Number Species Version
48 Eremochloa_ophiuroides v1.0


Order Family
Poales Poaceae

References Reference_title
A high-quality chromosome-scale assembly of the centipedegrass [Eremochloa ophiuroides (Munro) Hack.] genome provides insights into chromosomal structural evolution and prostrate growth habit

Database_name Figshare

Phragmites_australis

Number Species Version
49 Phragmites_australis v1.0


Order Family
Poales Poaceae

References Reference_title
Novel genome characteristics contribute to the invasiveness of Phragmites australis (common reed)

Database_name CoGe

Sporobolus_pyramidalis

Number Species Version
50 Sporobolus_pyramidalis v1.0


Order Family
Poales Poaceae

References Reference_title
A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species

Database_name CoGe

Sporobolus_stapfianus

Number Species Version
51 Sporobolus_stapfianus v1.0


Order Family
Poales Poaceae

References Reference_title
A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species

Database_name CoGe

Pennisetum_purpureum

Number Species Version
52 Pennisetum_purpureum v1.0


Order Family
Poales Poaceae

References Reference_title
Chromosome-scale genome assembly provides insights into speciation of allotetraploid and massive biomass accumulation of elephant grass (Pennisetum purpureum Schum.)

Database_name Figshare

Hordeum_marinum

Number Species Version
53 Hordeum_marinum v1.0


Order Family
Poales Poaceae

References Reference_title
The genome and gene editing system of sea barleygrass provide a novel platform for cereal domestication and stress tolerance studies

Database_name NGDC

Lolium_rigidum

Number Species Version
54 Lolium_rigidum v0.1


Order Family
Poales Poaceae

References Reference_title
Rounding up the annual ryegrass genome: High-quality reference genome of Lolium rigidum

Database_name NCBI

Paspalum_vaginatum

Number Species Version
55 Paspalum_vaginatum v3.1


Order Family
Poales Poaceae

References Reference_title
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass

Database_name phytozome

Panicum_miliaceum

Number Species Version
56 Panicum_miliaceum v1.0


Order Family
Poales Poaceae

References Reference_title
Biased mutations and gene losses underlying diploidization of the tetraploid broomcorn millet genome

Database_name Zenodo

Areca_catechu

Number Species Version
1 Areca_catechu v1.0


Order Family
Arecales Arecaceae

References Reference_title
Chromosome-scale genome assembly of areca palm (Areca catechu)

Database_name CNSA

Calamus_simplicifolius

Number Species Version
2 Calamus_simplicifolius v1.0


Order Family
Arecales Arecaceae

References Reference_title
The chromosome-level genome assemblies of two rattans (Calamus simplicifolius and Daemonorops jenkinsiana)

Database_name GigaDB

Daemonorops_jenkinsiana

Number Species Version
3 Daemonorops_jenkinsiana v1.0


Order Family
Arecales Palmaceae

References Reference_title
The chromosome-level genome assemblies of two rattans (Calamus simplicifolius and Daemonorops jenkinsiana)

Database_name GigaDB

Ensete_ventricosum

Number Species Version
1 Ensete_ventricosum v1.0


Order Family
Zingiberales Musaceae

References Reference_title
A Draft Genome Sequence for Ensete ventricosum, the Drought-Tolerant “Tree Against Hunger”

Database_name NCBI

Musa_schizocarpa

Number Species Version
2 Musa_schizocarpa v1.0


Order Family
Zingiberales Musaceae

References Reference_title
Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps

Database_name genoscope

Ensete_glaucum

Number Species Version
3 Ensete_glaucum v1.0


Order Family
Zingiberales Musaceae

References Reference_title
A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae

Database_name Banana genome hub

Musa_acuminata

Number Species Version
4 Musa_acuminata v4.0


Order Family
Zingiberales Musaceae

References Reference_title
Three New Genome Assemblies Support a Rapid Radiation in Musa acuminata (Wild Banana)

Database_name Banana genome hub

Musa_balbisiana

Number Species Version
5 Musa_balbisiana v1.1


Order Family
Zingiberales Musaceae

References Reference_title
A draft Musa balbisiana genome sequence for molecular genetics in polyploid, inter- and intra-specific Musa hybrids

Database_name Banana genome hub

Musa_itinerans

Number Species Version
6 Musa_itinerans v1.0


Order Family
Zingiberales Musaceae

References Reference_title
Whole genome sequencing of a banana wild relative Musa itinerans provides insights into lineage-specific diversification of the Musa genus

Database_name Banana genome hub

Wurfbainia_villosa

Number Species Version
7 Wurfbainia_villosa v1.0


Order Family
Zingiberales Cannaceae

References Reference_title
Chromosome-level genome assembly and functional characterization of terpene synthases provide insights into the volatile terpenoid biosynthesis of Wurfbainia villosa

Database_name Figshare

Apostasia_shenzhenica

Number Species Version
1 Apostasia_shenzhenica v1.0


Order Family
Asparagales Orchidaceae

References Reference_title
The Apostasia genome and the evolution of orchids

Database_name NCBI

Phalaenopsis_aphrodite

Number Species Version
2 Phalaenopsis_aphrodite v1.0


Order Family
Asparagales Orchidaceae

References Reference_title
Chromosome-level assembly, genetic and physical mapping of Phalaenopsis aphrodite genome provides new insights into species adaptation and resources for orchid breeding

Database_name Phalaenopsis aphrodite Genome Resources

Asparagus_officinalis

Number Species Version
3 Asparagus_officinalis v1.1


Order Family
Asparagales Asparagaceae

References Reference_title
The asparagus genome sheds light on the origin and evolution of a young Y chromosome

Database_name Phytozome

Asparagus_setaceus

Number Species Version
4 Asparagus_setaceus v4.0


Order Family
Asparagales Asparagaceae

References Reference_title
Chromosome-level genome assembly, annotation and evolutionary analysis of the ornamental plant Asparagus setaceus

Database_name Dryad

Allium_cepa

Number Species Version
5 Allium_cepa v1.2


Order Family
Asparagales Amaryllidaceae

References Reference_title
Insights from the first genome assembly of Onion (Allium cepa)

Database_name Onion Genome Sequencing

Allium_sativum

Number Species Version
6 Allium_sativum v1.0


Order Family
Asparagales Amaryllidaceae

References Reference_title
A Chromosome-Level Genome Assembly of Garlic (Allium sativum) Provides Insights into Genome Evolution and Allicin Biosynthesis

Database_name Figshare

Cymbidium_ensifolium

Number Species Version
7 Cymbidium_ensifolium v1.0


Order Family
Asparagales Orchidaceae

References Reference_title
The Cymbidium genome reveals the evolution of unique morphological traits

Database_name CNGB

Dendrobium_chrysotoxum

Number Species Version
8 Dendrobium_chrysotoxum v1.0


Order Family
Asparagales Orchidaceae

References Reference_title
Chromosome-scale assembly of the Dendrobium chrysotoxum genome enhances the understanding of orchid evolution

Database_name NCBI

Dendrobium_nobile

Number Species Version
9 Dendrobium_nobile v1.0


Order Family
Asparagales Orchidaceae

References Reference_title
Chromosome-Level Genome Assembly for Acer pseudosieboldianum and Highlights to Mechanisms for Leaf Color and Shape Change

Database_name NCBI

Gastrodia_menghaiensis

Number Species Version
10 Gastrodia_menghaiensis v1.0


Order Family
Asparagales Orchidaceae

References Reference_title
The Gastrodia menghaiensis (Orchidaceae) genome provides new insights of orchid mycorrhizal interactions

Database_name Figshare

Papilionanthehookeriana_xteres

Number Species Version
11 Papilionanthehookeriana_xteres v3.0


Order Family
Asparagales Orchidaceae

References Reference_title
Genome assembly and chemogenomic profiling of National Flower of Singapore Papilionanthe Miss Joaquim ‘Agnes’ reveals metabolic pathways regulating floral traits

Database_name NA

Dioscorea_dumetorum

Number Species Version
1 Dioscorea_dumetorum v1.0


Order Family
Dioscoreales Dioscoreaceae

References Reference_title
High Contiguity de novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read Sequencing

Database_name Universität Bielefeld

Dioscorea_alata

Number Species Version
2 Dioscorea_alata v1.0


Order Family
Dioscoreales Dioscoreaceae

References Reference_title
Chromosome evolution and the genetic basis of agronomically important traits in greater yam

Database_name Phytozome

Cremastra_appendiculata

Number Species Version
1 Cremastra_appendiculata v1.0


Order Family
Orchidaceae Epidendroideae

References Reference_title
A draft genome of the medicinal plant Cremastra appendiculata (D. Don) provides insights into the colchicine biosynthetic pathway

Database_name CNGB

Amaranthus_hypochondriacus

Number Species Version
1 Amaranthus_hypochondriacus v1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
The Amaranth Genome: Genome, Transcriptome, and Physical Map Assembly

Database_name CoGe

Beta_patula

Number Species Version
2 Beta_patula v1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
Genomes of the wild beets Beta patula and Beta vulgaris ssp. Maritima

Database_name The Beta vulgaris Resource

Beta_vulgaris

Number Species Version
3 Beta_vulgaris EL10_1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
Genomes of the wild beets Beta patula and Beta vulgaris ssp. maritima

Database_name Phytozome

Chenopodium_pallidicaule

Number Species Version
4 Chenopodium_pallidicaule v4.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
The genome of Chenopodium pallidicaule: An emerging Andean super grain

Database_name CoGe

Chenopodium_quinoa

Number Species Version
5 Chenopodium_quinoa v1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
A high-quality genome assembly of quinoa provides insights into the molecular basis of salt bladder-based salinity tolerance and the exceptional nutritional value

Database_name Phytozome

Spinacia_oleracea

Number Species Version
6 Spinacia_oleracea v3.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
Draft genome of spinach and transcriptome diversity of 120 Spinacia accessions

Database_name Phytozome

Aldrovanda_vesiculosa

Number Species Version
7 Aldrovanda_vesiculosa v1.0


Order Family
Caryophyllales Droseraceae

References Reference_title
Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory

Database_name CARNIVOROM

Dionaea_muscipula

Number Species Version
8 Dionaea_muscipula v1.0


Order Family
Caryophyllales Droseraceae

References Reference_title
Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory

Database_name CARNIVOROM

Drosera_spatulata

Number Species Version
9 Drosera_spatulata v1.0


Order Family
Caryophyllales Droseraceae

References Reference_title
Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory

Database_name CARNIVOROM

Simmondsia_chinensis

Number Species Version
10 Simmondsia_chinensis v1.0


Order Family
Caryophyllales Simmondsiaceae

References Reference_title
The genome of jojoba (Simmondsia chinensis): A taxonomically isolated species that directs wax ester accumulation in its seeds

Database_name NGDB

Fagopyrum_esculentum

Number Species Version
11 Fagopyrum_esculentum v1.0


Order Family
Caryophyllales Polygonaceae

References Reference_title
Assembly of the draft genome of buckwheat and its applications in identifying agronomically useful genes

Database_name BGDB

Fagopyrum_tataricum

Number Species Version
12 Fagopyrum_tataricum v2.0


Order Family
Caryophyllales Polygonaceae

References Reference_title
The Tartary Buckwheat Genome Provides Insights into Rutin Biosynthesis and Abiotic Stress Tolerance

Database_name MBKBASE

Polygonum_cuspidatum

Number Species Version
13 Polygonum_cuspidatum v1.1


Order Family
Caryophyllales Polygonaceae

References Reference_title
Assembly and Annotation of a Draft Genome of the Medicinal Plant Polygonum cuspidatum

Database_name NGDC

Carnegiea_gigantea

Number Species Version
14 Carnegiea_gigantea v1.0


Order Family
Caryophyllales Cactaceae

References Reference_title
Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti

Database_name Dryad

Amaranthus_cruentus

Number Species Version
15 Amaranthus_cruentus v1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
A chromosome-level Amaranthus cruentus genome assembly highlights gene family evolution and biosynthetic gene clusters that may underpin the nutritional value of this traditional crop

Database_name SelfDB

Atriplex_hortensis

Number Species Version
16 Atriplex_hortensis v1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
A Chromosome-Scale Assembly of the Garden Orach (Atriplex hortensis L.) Genome Using Oxford Nanopore Sequencing

Database_name Coge

Hylocereus_undatus

Number Species Version
17 Hylocereus_undatus v1.0


Order Family
Caryophyllales Cactaceae

References Reference_title
A chromosome-scale genome sequence of pitaya (Hylocereus undatus) provides novel insights into the genome evolution and regulation of betalain biosynthesis

Database_name PitayaGD

Mesembryanthemum_crystallinum

Number Species Version
18 Mesembryanthemum_crystallinum v1.0


Order Family
Caryophyllales Aizoaceae

References Reference_title
High-quality ice plant reference genome analysis provides insights into genome evolution and allows exploration of genes involved in the transition from C3 to CAM pathways

Database_name SelfDB

Haloxylon_ammodendron

Number Species Version
19 Haloxylon_ammodendron v1.0


Order Family
Caryophyllales Amaranthaceae

References Reference_title
Chromosome-level genome assembly of a xerophytic plant, Haloxylon ammodendron

Database_name Figshare

Malania_oleifera

Number Species Version
1 Malania_oleifera v1.0


Order Family
Santalales Olacaceae

References Reference_title
Genome sequence of Malania oleifera, a tree with great value for nervonic acid production

Database_name GigaDB

Actinidia_chinensis

Number Species Version
1 Actinidia_chinensis v1.2


Order Family
Ericales Actinidiaceae

References Reference_title
A high-quality Actinidia chinensis (kiwifruit) genome

Database_name NCBI

Aegiceras_corniculatum

Number Species Version
2 Aegiceras_corniculatum v1.0


Order Family
Ericales Primulaceae

References Reference_title
Chromosome-level assembly of the mangrove plant Aegiceras corniculatum genome generated through Illumina, PacBio and Hi-C sequencing technologies

Database_name CNGB

Primula_veris

Number Species Version
3 Primula_veris v1.0


Order Family
Ericales Primulaceae

References Reference_title
The draft genome of Primula veris yields insights into the molecular basis of heterostyly

Database_name Dryad

Diospyros_lotus

Number Species Version
4 Diospyros_lotus v1.1


Order Family
Ericales Ebenaceae

References Reference_title
The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

Database_name Bioinformatics & Systems Biology

Clethra_arborea

Number Species Version
5 Clethra_arborea v2.0


Order Family
Ericales Clethraceae

References Reference_title
Annotated genome sequences of the carnivorous plant Roridula gorgonias and a non-carnivorous relative, Clethra arborea

Database_name Dryad

Roridula_gorgonias

Number Species Version
6 Roridula_gorgonias v1.0


Order Family
Ericales Roridulaceae

References Reference_title
Annotated genome sequences of the carnivorous plant Roridula gorgonias and a non-carnivorous relative, Clethra arborea

Database_name Dryad

Camellia_oleifera

Number Species Version
7 Camellia_oleifera v1.0


Order Family
Ericales Theaceae

References Reference_title
The genome of oil-Camellia and population genomics analysis provide insights into seed oil domestication

Database_name Zenodo

Gilia_yorkii

Number Species Version
8 Gilia_yorkii v1.0


Order Family
Ericales Polemoniaceae

References Reference_title
Chromosome-Scale Genome Assembly of Gilia yorkii Enables Genetic Mapping of Floral Traits in an Interspecies Cross

Database_name CoGe

Rhododendron_henanense

Number Species Version
9 Rhododendron_henanense v1.0


Order Family
Ericales Ericaceae

References Reference_title
The chromosome-scale genome assembly, annotation and evolution of Rhododendron henanense subsp. Lingbaoense

Database_name RPGD

Rhododendron_ovatum

Number Species Version
10 Rhododendron_ovatum v1.0


Order Family
Ericales Ericaceae

References Reference_title
High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution

Database_name RPGD

Rhododendron_simsii

Number Species Version
11 Rhododendron_simsii v1.0


Order Family
Ericales Ericaceae

References Reference_title
Chromosome-level genome assembly of a parent species of widely cultivated azaleas

Database_name RPGD

Rhododendron_williamsianum

Number Species Version
12 Rhododendron_williamsianum v1.0


Order Family
Ericales Ericaceae

References Reference_title
The Rhododendron Genome and Chromosomal Organization Provide Insight into Shared Whole-Genome Duplications across the Heath Family (Ericaceae)

Database_name RPGD

Synsepalum_dulcificum

Number Species Version
13 Synsepalum_dulcificum v1.0


Order Family
Ericales Sapotaceae

References Reference_title
The Chromosome-Level Genome of Miracle Fruit (Synsepalum dulcificum) Provides New Insights Into the Evolution and Function of Miraculin

Database_name CNGB

Vitellaria_paradoxa

Number Species Version
14 Vitellaria_paradoxa v1.0


Order Family
Ericales Sapotaceae

References Reference_title
Genomic Resources to Guide Improvement of the Shea Tree

Database_name ORCAE

Rhododendron_delavayi

Number Species Version
15 Rhododendron_delavayi v1.0


Order Family
Ericales Ericaceae

References Reference_title
The draft genome assembly of Rhododendron delavayi Franch. var. delavayi

Database_name GigaDB

Rhododendron_molle

Number Species Version
16 Rhododendron_molle v2.0


Order Family
Ericales Ericaceae

References Reference_title
Gapless genome assembly of azalea and multi-omics investigation into divergence between two species with distinct flower color

Database_name NGDC

Rhododendron_griersonianum

Number Species Version
17 Rhododendron_griersonianum RGv1.1


Order Family
Ericales Ericaceae

References Reference_title
Chromosome-level genome assembly and population genetic analysis of a critically endangered rhododendron provide insights into its conservation

Database_name NCBI

Rhododendron_ripense

Number Species Version
18 Rhododendron_ripense v1.1


Order Family
Ericales Ericaceae

References Reference_title
Whole-genome sequencing and analysis of two azaleas, Rhododendron ripense and Rhododendron kiyosumense

Database_name Plantgarden

Rhododendron_prattii

Number Species Version
19 Rhododendron_prattii v1.0


Order Family
Ericales Ericaceae

References Reference_title
Pervasive hybridization during evolutionary radiation of Rhododendron subgenus Hymenanthes in mountains of southwest China

Database_name NGDC

Vaccinium_corymbosum

Number Species Version
20 Vaccinium_corymbosum v1.0


Order Family
Ericales Ericaceae

References Reference_title
Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

Database_name Coge

Vaccinium_darrowii

Number Species Version
21 Vaccinium_darrowii v2.4


Order Family
Ericales Ericaceae

References Reference_title
High-quality reference genome and annotation aids understanding of berry development for evergreen blueberry (Vaccinium darrowii)

Database_name GDV

Vaccinium_caesariense

Number Species Version
22 Vaccinium_caesariense v2.0


Order Family
Ericales Ericaceae

References Reference_title
Autopolyploid inheritance and a heterozygous reciprocal translocation shape chromosome genetic behavior in tetraploid blueberry (Vaccinium corymbosum)

Database_name GDV

Vaccinium_macrocarpon

Number Species Version
23 Vaccinium_macrocarpon v1.0


Order Family
Ericales Ericaceae

References Reference_title
Contrasting a reference cranberry genome to a crop wild relative provides insights into adaptation, domestication, and breeding.

Database_name GDV

Vaccinium_microcarpum

Number Species Version
24 Vaccinium_microcarpum v1.0


Order Family
Ericales Ericaceae

References Reference_title
Chromosome-Level Genome Assembly of the American Cranberry ( Vaccinium macrocarpon Ait.) and Its Wild Relative Vaccinium microcarpum

Database_name GDV

Vaccinium_oxycoccos

Number Species Version
25 Vaccinium_oxycoccos v1.0


Order Family
Ericales Ericaceae

References Reference_title
Contrasting a reference cranberry genome to a crop wild relative provides insights into adaptation, domestication, and breeding.

Database_name GDV

Vaccinium_myrtillus

Number Species Version
26 Vaccinium_myrtillus v1.0


Order Family
Ericales Ericaceae

References Reference_title
A chromosome-scale assembly of the bilberry genome identifies a complex locus controlling berry anthocyanin composition

Database_name GDV

Camptotheca_acuminata

Number Species Version
1 Camptotheca_acuminata v2.4


Order Family
Cornales Nyssaceae

References Reference_title
De novo genome assembly of Camptotheca acuminata, a natural source of the anti-cancer compound camptothecin

Database_name Dryad

Genlisea_aurea

Number Species Version
1 Genlisea_aurea v1.0


Order Family
Lamiales Lentibulariaceae

References Reference_title
Comparative genomic analysis of Genlisea (corkscrew plants—Lentibulariaceae) chloroplast genomes reveals an increasing loss of the ndh genes

Database_name NCBI

Mimulus_guttatus

Number Species Version
2 Mimulus_guttatus v2.0


Order Family
Lamiales Phrymaceae

References Reference_title
Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times. Zeng L, et al. Nat Commun 2014 Sep 24

Database_name Phytozome

Mimulus_luteus

Number Species Version
3 Mimulus_luteus v1.0


Order Family
Lamiales Phrymaceae

References Reference_title
Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower

Database_name CoGe

Strobilanthes_cusia

Number Species Version
4 Strobilanthes_cusia v1.0


Order Family
Lamiales Acanthaceae

References Reference_title
Blue genome: chromosome-scale genome reveals the evolutionary and molecular basis of indigo biosynthesis in Strobilanthes cusia

Database_name Strobilanthes Cusia Genome Database

Fraxinus_excelsior

Number Species Version
5 Fraxinus_excelsior v2.0


Order Family
Lamiales Oleaceae

References Reference_title
Genome sequence and genetic diversity of European ash trees

Database_name ASH

Olea_europaea

Number Species Version
6 Olea_europaea v1.0


Order Family
Lamiales Oleaceae

References Reference_title
Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)

Database_name Phytozome

Boea_hygrometrica

Number Species Version
7 Boea_hygrometrica v1.0


Order Family
Lamiales Gesneriaceae

References Reference_title
The resurrection genome of Boea hygrometrica: A blueprint for survival of dehydration. Xiao L, et al. Proc Natl Acad Sci U S A 2015 May 5

Database_name NCBI

Antirrhinum_majus

Number Species Version
8 Antirrhinum_majus v1.0


Order Family
Lamiales Plantaginaceae

References Reference_title
Genome structure and evolution of Antirrhinum majus L

Database_name snapdragon genome database

Callicarpa_americana

Number Species Version
9 Callicarpa_americana v1.0


Order Family
Lamiales Callicarpa

References Reference_title
The Reference Genome Sequence of Scutellaria baicalensis Provides Insights into the Evolution of Wogonin Biosynthesis

Database_name GigaDB

Pogostemon_cablin

Number Species Version
10 Pogostemon_cablin v1.0


Order Family
Lamiales Lamiaceae

References Reference_title
Building an octaploid genome and transcriptome of the medicinal plant Pogostemon cablin from Lamiales

Database_name Figshare

Fraxinus_pennsylvanica

Number Species Version
11 Fraxinus_pennsylvanica v1.0


Order Family
Lamiales Oleaceae

References Reference_title
A high-quality reference genome for Fraxinus pennsylvanica for ash species restoration and research

Database_name Zenodo

Jasminum_sambac

Number Species Version
12 Jasminum_sambac v1.0


Order Family
Lamiales Oleaceae

References Reference_title
Genomes of single- and double-petal jasmines (Jasminum sambac) provide insights into their divergence time and structural variations

Database_name NGDC

Perilla_frutescens

Number Species Version
13 Perilla_frutescens v1.0


Order Family
Lamiales Lamiaceae

References Reference_title
Incipient diploidization of the medicinal plant Perilla within 10,000 years

Database_name NCBI

Salvia_hispanica

Number Species Version
14 Salvia_hispanica v1.0


Order Family
Lamiales Lamiaceae

References Reference_title
A chromosome-level genome assembly of chia provides insights into high omega-3 content and coat color variation of its seeds

Database_name Genhua

Salvia_rosmarinus

Number Species Version
15 Salvia_rosmarinus v1.0


Order Family
Lamiales Lamiaceae

References Reference_title
The chromosome-scale assembly of the Salvia rosmarinus genome provides insight into carnosic acid biosynthesis

Database_name Figshare

Capsicum_baccatum

Number Species Version
1 Capsicum_baccatum v2.0


Order Family
Solanales Solanaceae

References Reference_title
New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication

Database_name NCBI

Capsicum_chinense

Number Species Version
2 Capsicum_chinense v2.0


Order Family
Solanales Solanaceae

References Reference_title
New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication

Database_name NCBI

Petunia_axillaris

Number Species Version
3 Petunia_axillaris v1.6.2


Order Family
Solanales Solanaceae

References Reference_title
Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida

Database_name SGN

Petunia_inflata

Number Species Version
4 Petunia_inflata v1.0.1


Order Family
Solanales Solanaceae

References Reference_title
Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida

Database_name SGN

Solanum_aethiopicum

Number Species Version
5 Solanum_aethiopicum v1.0


Order Family
Solanales Solanaceae

References Reference_title
Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome

Database_name GigaDB

Solanum_chacoense

Number Species Version
6 Solanum_chacoense v4.1


Order Family
Solanales Solanaceae

References Reference_title
Genome sequence of M6, a diploid inbred clone of the high‐glycoalkaloid‐producing tuber‐bearing potato species Solanum chacoense, reveals residual heterozygosity

Database_name Dryad

Solanum_chilense

Number Species Version
7 Solanum_chilense v1.0


Order Family
Solanales Solanaceae

References Reference_title
The de novo Reference Genome and Transcriptome Assemblies of the Wild Tomato Species Solanum chilense Highlights Birth and Death of NLR Genes Between Tomato Species

Database_name NCBI

Solanum_pimpinellifolium

Number Species Version
8 Solanum_pimpinellifolium v1.0


Order Family
Solanales Solanaceae

References Reference_title
De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing

Database_name SGN

Cuscuta_campestris

Number Species Version
9 Cuscuta_campestris v1.0


Order Family
Solanales Convolvulaceae

References Reference_title
Convergent horizontal gene transfer and cross-talk of mobile nucleic acids in parasitic plants

Database_name NCBI

Physalis_pubescens

Number Species Version
10 Physalis_pubescens v1.0


Order Family
Solanales Solanaceae

References Reference_title
The Physalis floridana genome provides insights into the biochemical and morphological evolution of Physalis fruits

Database_name CNGB

Solanum_muricatum

Number Species Version
11 Solanum_muricatum v1.0


Order Family
Solanales Solanaceae

References Reference_title
Chromosome‐level pepino genome provides insights into genome evolution and anthocyanin biosynthesis in Solanaceae

Database_name NGDC

Solanum_lycopersicoides

Number Species Version
12 Solanum_lycopersicoides v1.0


Order Family
Solanales Solanaceae

References Reference_title
A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity

Database_name SGN

Solanum_lycopersicum

Number Species Version
13 Solanum_lycopersicum ITAG4.0


Order Family
Solanales Solanaceae

References Reference_title
De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing

Database_name SGN

Capsicum_annuum

Number Species Version
14 Capsicum_annuum CM334


Order Family
Solanales Solanaceae

References Reference_title
Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library

Database_name SGN

Solanum_pennellii

Number Species Version
15 Solanum_pennellii v2.0


Order Family
Solanales Solanaceae

References Reference_title
De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing

Database_name SGN

Coffea_humblotiana

Number Species Version
16 Coffea_humblotiana v1.0


Order Family
Solanales Solanaceae

References Reference_title
WCSdb: a database of wild Coffea species

Database_name SGN

Nicotiana_benthamiana

Number Species Version
17 Nicotiana_benthamiana v1.0


Order Family
Solanales Solanaceae

References Reference_title
A draft genome sequence of Nicotiana benthamiana to enhance molecular plant-microbe biology research

Database_name SGN

Nicotiana_attenuata

Number Species Version
18 Nicotiana_attenuata v2.0


Order Family
Solanales Solanaceae

References Reference_title
Wild tobacco genomes reveal the evolution of nicotine biosynthesis

Database_name SGN

Nicotiana_tabacum

Number Species Version
19 Nicotiana_tabacum v4.5


Order Family
Solanales Solanaceae

References Reference_title
A reference genome for Nicotiana tabacum enables map-based cloning of homeologous loci implicated in nitrogen utilization efficiency

Database_name SGN

Nicotiana_tomentosiformis

Number Species Version
20 Nicotiana_tomentosiformis v1.0


Order Family
Solanales Solanaceae

References Reference_title
Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis

Database_name SGN

Solanum_habrochaites

Number Species Version
21 Solanum_habrochaites v1.0


Order Family
Solanales Solanaceae

References Reference_title
A draft genome assembly for the heterozygous wild tomato Solanum habrochaites highlights haplotypic structural variations of intracellular immune receptors

Database_name SGN

Physalis_grisea

Number Species Version
22 Physalis_grisea v1.3.2


Order Family
Solanales Solanaceae

References Reference_title
Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome

Database_name github

Physalis_pruinosa

Number Species Version
23 Physalis_pruinosa v2.0.4


Order Family
Solanales Solanaceae

References Reference_title
Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome

Database_name github

Solanum_tuberosum

Number Species Version
24 Solanum_tuberosum C88v1.0


Order Family
Solanales Solanaceae

References Reference_title
Genome architecture and tetrasomic inheritance of autotetraploid potato

Database_name SpudDB

Solanum_melongena

Number Species Version
25 Solanum_melongena v4.0


Order Family
Solanales Solanaceae

References Reference_title
Improved genome assembly and pan-genome provide key insights into eggplant domestication and breeding

Database_name SGN

Datura_stramonium

Number Species Version
26 Datura_stramonium UCR_Dstr_1.4


Order Family
Solanales Solanaceae

References Reference_title
Datura genome reveals duplications of psychoactive alkaloid biosynthetic genes and high mutation rate following tissue culture

Database_name NCBI

Nicotiana_sylvestris

Number Species Version
27 Nicotiana_sylvestris v1.0


Order Family
Solanales Solanaceae

References Reference_title
Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis

Database_name NCBI

Solanum_commersonii

Number Species Version
28 Solanum_commersonii v1.0


Order Family
Solanales Solanaceae

References Reference_title
The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives

Database_name NCBI

Coffea_canephora

Number Species Version
1 Coffea_canephora v1.0


Order Family
Gentianales Rubiaceae

References Reference_title
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

Database_name NCBI

Catharanthus_roseus

Number Species Version
2 Catharanthus_roseus v1.0


Order Family
Gentianales Apocynaceae

References Reference_title
Genome‐guided investigation of plant natural product biosynthesis

Database_name Dryad

Neolamarckia_cadamba

Number Species Version
3 Neolamarckia_cadamba v1.0


Order Family
Gentianales Rubiaceae

References Reference_title
Chromosome-level assembly of the Neolamarckia cadamba genome provides insights into the evolution of cadambine biosynthesis

Database_name Figshare

Carthamus_tinctorius

Number Species Version
1 Carthamus_tinctorius v1.0


Order Family
Asterales Asteraceae

References Reference_title
The chromosome‐scale reference genome of safflower (Carthamus tinctorius) provides insights into linoleic acid and flavonoid biosynthesis

Database_name The Genome Database of Carthamus tinctorius

Chrysanthemum_nankingense

Number Species Version
2 Chrysanthemum_nankingense v2.0


Order Family
Asterales Asteraceae

References Reference_title
The Chrysanthemum nankingense Genome Provides Insights into the Evolution and Diversification of Chrysanthemum Flowers and Medicinal Traits

Database_name Chrysanthemum Genome Database

Helianthus_annuus

Number Species Version
3 Helianthus_annuus v2.0


Order Family
Asterales Asteraceae

References Reference_title
The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

Database_name NCBI

Lactuca_sativa

Number Species Version
4 Lactuca_sativa v5.0


Order Family
Asterales Asteraceae

References Reference_title
Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce

Database_name Phytozome

Platycodon_grandiflorus

Number Species Version
5 Platycodon_grandiflorus v1.0


Order Family
Asterales Campanulaceae

References Reference_title
Whole-genome, transcriptome, and methylome analyses provide insights into the evolution of platycoside biosynthesis in Platycodon grandiflorus, a medicinal plant

Database_name Self DB

Arctium_lappa

Number Species Version
6 Arctium_lappa v1.0


Order Family
Asterales Asteraceae

References Reference_title
The first high-quality chromosomal genome assembly of a medicinal and edible plant Arctium lappa

Database_name Figshare

Taraxacum_koksaghyz

Number Species Version
7 Taraxacum_koksaghyz v1.0


Order Family
Asterales Asteraceae

References Reference_title
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum

Database_name NGDC

Taraxacum_mongolicum

Number Species Version
8 Taraxacum_mongolicum v1.0


Order Family
Asterales Asteraceae

References Reference_title
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum

Database_name NGDC

Glebionis_coronaria

Number Species Version
9 Glebionis_coronaria v1.0


Order Family
Asterales Asteraceae

References Reference_title
Chromosome-level genome of a leaf vegetable Glebionis coronaria provides insights into the biosynthesis of monoterpenoids contributing to its special aroma

Database_name figshare

Lonicera_japonica

Number Species Version
1 Lonicera_japonica v1.0


Order Family
Dipsacales Caprifoliaceae

References Reference_title
The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration

Database_name CNGB

Apium_graveolens

Number Species Version
1 Apium_graveolens v1.0


Order Family
Apiales Apiaceae

References Reference_title
The celery genome sequence reveals sequential paleo‐polyploidizations, karyotype evolution and resistance gene reduction in apiales

Database_name CGDB

Coriandrum_sativum

Number Species Version
2 Coriandrum_sativum v1.0


Order Family
Apiales Apiaceae

References Reference_title
Deciphering the high‐quality genome sequence of coriander that causes controversial feelings

Database_name CGDB

Daucus_carota

Number Species Version
3 Daucus_carota v2.0


Order Family
Apiales Apiaceae

References Reference_title
The genome sequence of ‘Kurodagosun’, a major carrot variety in Japan and China, reveals insights into biological research and carrot breeding

Database_name CGDB

Panax_ginseng

Number Species Version
4 Panax_ginseng v1.1


Order Family
Apiales Araliaceae

References Reference_title
Genome and evolution of the shade-requiring medicinal herb Panax ginseng

Database_name GinsengDB

Aralia_elata

Number Species Version
5 Aralia_elata v1.0


Order Family
Apiales Araliaceae

References Reference_title
Deletion and tandem duplications of biosynthetic genes drive the diversity of triterpenoids in Aralia elata

Database_name Dryad

Angelica_sinensis

Number Species Version
6 Angelica_sinensis v1.0


Order Family
Apiales Apiaceae

References Reference_title
The chromosome-level genome of female ginseng (Angelica sinensis) provides insights into molecular mechanisms and evolution of coumarin biosynthesis

Database_name CNSA

Kalanchoe_fedtschenkoi

Number Species Version
1 Kalanchoe_fedtschenkoi v2.0


Order Family
Saxifragales Crassulaceae

References Reference_title
The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism

Database_name Phytozome

Rhodiola_crenulata

Number Species Version
2 Rhodiola_crenulata v1.0


Order Family
Saxifragales Crassulaceae

References Reference_title
Draft genome sequence of the Tibetan medicinal herb Rhodiola crenulata

Database_name GigaDB

Paeonia_suffruticosa

Number Species Version
3 Paeonia_suffruticosa v6.0


Order Family
Saxifragales Paeoniaceae

References Reference_title
Draft genome of the famous ornamental plant Paeonia suffruticosa

Database_name CNGB

Paeonia_ostii

Number Species Version
4 Paeonia_ostii v1.0


Order Family
Saxifragales Paeoniaceae

References Reference_title
Genomic basis of the giga-chromosomes and giga-genome of tree peony Paeonia ostii

Database_name CNGB

Vitis_amurensis

Number Species Version
1 Vitis_amurensis v1.0


Order Family
Vitales Vitaceae

References Reference_title
The genome of Shanputao (Vitis amurensis) provides a new insight into cold tolerance of grapevine

Database_name grapeworld

Vitis_vinifera

Number Species Version
2 Vitis_vinifera v2.1


Order Family
Vitales Vitaceae

References Reference_title
The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication

Database_name Phytozome

Cissus_rotundifolia

Number Species Version
3 Cissus_rotundifolia v1.0


Order Family
Vitales Vitaceae

References Reference_title
A genome for Cissus illustrates features underlying its evolutionary success in dry savannas

Database_name NGDC

Vitis_riparia

Number Species Version
4 Vitis_riparia v1.0


Order Family
Vitales Vitaceae

References Reference_title
HiFi chromosome-scale diploid assemblies of the grape rootstocks 110R, Kober 5BB, and 101–14 Mgt

Database_name Zenodo

Vitis_rupestris

Number Species Version
5 Vitis_rupestris v1.0


Order Family
Vitales Vitaceae

References Reference_title
HiFi chromosome-scale diploid assemblies of the grape rootstocks 110R, Kober 5BB, and 101–14 Mgt

Database_name Zenodo

Vitis_berlandieri

Number Species Version
6 Vitis_berlandieri v1.0


Order Family
Vitales Vitaceae

References Reference_title
HiFi chromosome-scale diploid assemblies of the grape rootstocks 110R, Kober 5BB, and 101–14 Mgt

Database_name Zenodo

Vitis_xlabruscana

Number Species Version
7 Vitis_xlabruscana v1.0


Order Family
Vitales Vitaceae

References Reference_title
De novo whole-genome assembly in an interspecific hybrid table grape, ‘Shine Muscat’

Database_name Plant GARDEN

Benincasa_hispida

Number Species Version
1 Benincasa_hispida v1.0


Order Family
Cucurbitales Curcurbitaceae

References Reference_title